ahhhhh
I see now what you mean, and i am so sorry i didnt understand before.
It seems to be working now, I am not sure if it was the latest fix i did, can you try again?
I just tried the following:
I created an encounter, like the image i have attached
Attachment 37769
Then I opened a map, and dragged each token to the map
As I drag them, each icon in the encounter becomes a checkmark, showing me i have added to the map
After that, clicking the down arrow added all tokens to the combat tracker, and it seems to be working ok, identifying each token on the map to the corresponding one in the tracker